The software tools you can use for your research.
ShiftCrypt enables the compression of chemical shift information for proteins into single per-residue values that reflect the in-solution biophysical properties of those residues. You can also align proteins based on the ShiftCrypt value.,
Funding: G.0328.16N (FWO),
PSP (Phase Separating Protein) enables you to predict whether a protein is likely to phase-separate with a particular mechanism involving RNA interacts (FUS-like proteins). It will highlight the regions in your protein that are involved mechanistically, and provide an overall score.
Funding: G.0328.16N (FWO), Ph.D. grant Daniele Raimondi (IWT),
Our new b2bTools interface gives integrated access to individual predictors, and includes a novel feature to explore prediction-based 'biophysical variation' of proteins from a multiple sequence alignment.
Funding: G.0328.16N (FWO), RNAct (EC),
RINspector is a CytoScape app that combines protein-structure based network analysis with DynaMine predictions
CING is a software suite for the validation of NMR structure ensembles.
Sequence-based Homo- and Heteromeric Protein-protein Interaction sites prediction using Random Forest; a key feature of this method are the DynaMine predictions