Biophysical Proteome Atlas

Chicken

Gallus gallus

Sequence-based biophysical predictions for the chicken reference proteome from UniProt.

Traditionally, proteins are described in a single static state (a picture). It is now increasingly recognised that many proteins can adopt multiple states and move between these conformational states dynamically (a movie). Even more, not every protein has a well-defined three-dimensional structure, many are partly or fully disordered. These predictions describe backbone and side-chain dynamics, disorder, early folding events, beta-sheet aggregation and phase separation.


In this atlas

2,316

Entries here

2,178

Genes

35

Chromosomes

2,318

Reviewed in UniProt

Browse all entries

Last updated 3 minutes ago.

About this proteome

Extracted from UniProtKB

No description is available for this proteome from UniProt.

What is included

This atlas covers the reviewed entries of this proteome — the manually curated Swiss-Prot section of UniProtKB. That is 5.3% of it. The other 41,394 entries are unreviewed (TrEMBL) and are not included, which is why the count above is smaller than the proteome. You can run the same predictions on any of them yourself in the online predictors.

2,318 reviewed · 5.3% 41,394 unreviewed · 94.7% 43,712 in the proteome
UniProt proteome
UP000000539
Taxonomy
9031 · CHICK
Proteome type
Reference proteome
Strain
Broiler
Superkingdom
eukaryota
Genome assembly
GCA_016699485.1 · Ensembl
Completeness (BUSCO)
98% · 8192/8338

Source: UniProt proteome UP000000539, last modified 22 Apr 2026. Retrieved 7 Sep 2026 (5 days, 17 hours ago) and cached for a week.


Most viewed chicken proteins

What visitors are reading in this proteome — 1,814 entry views in total.

  1. 1 P27042 LYG_CHICK Chromosome 1 13 views
  2. 2 P10157 · ETS2 ETS2_CHICK Chromosome 1 12 views
  3. 3 Q2AB83 · TAS2R40 T2R40_CHICK Chromosome 1 10 views
  4. 4 P0C1H4 · H2B-V H2B5_CHICK Chromosome 1 9 views
  5. 5 Q5ZKG1 · MRPL51 RM51_CHICK Chromosome 1 9 views
  6. 6 Q5ZKP4 · TRAPPC2 TPPC2_CHICK Chromosome 1 9 views
  7. 7 Q65Z91 · TSKU TSK_CHICK Chromosome 1 9 views
  8. 8 O12940 · TOM1 TOM1_CHICK Chromosome 1 8 views
  9. 9 P02112 · HBB HBB_CHICK Chromosome 1 8 views
  10. 10 P07583 · CG-1B LEG4_CHICK Chromosome 1 8 views

What do we provide?

Sequence-based predictions that help explain the behaviour of the proteins in the chicken proteome. Not all of these proteins, or regions of them, have a well-defined three-dimensional structure as available from the PDB; many are dynamic or ambiguous. These predictions give clues as to how such regions behave.

DynaMine
backbone and side-chain dynamics
DisoMine
disorder
EFoldMine
early folding
AgMata
beta-sheet aggregation
PSPer
phase separation

How do I proceed?

Open the entry list and click a UniProt accession. Each entry page carries:

  • Overview — every prediction on one plot.
  • Interpretation — disorder classified as order, transition or disorder.
  • Values and Statistics — the numbers behind the plots.
  • Sequence — residues coloured by prediction.
  • PSP — phase-separation propensity.
  • Visualization 1D-3D — a 3D model coloured by prediction.
  • Downloads — sequence, predictions and structures.

Prefer code? Everything is available through the REST API.