Biophysical Proteome Atlas

Pig

Sus scrofa

Sequence-based biophysical predictions for the pig reference proteome from UniProt.

Traditionally, proteins are described in a single static state (a picture). It is now increasingly recognised that many proteins can adopt multiple states and move between these conformational states dynamically (a movie). Even more, not every protein has a well-defined three-dimensional structure, many are partly or fully disordered. These predictions describe backbone and side-chain dynamics, disorder, early folding events, beta-sheet aggregation and phase separation.


In this atlas

1,463

Entries here

1,402

Genes

22

Chromosomes

1,463

Reviewed in UniProt

Browse all entries

Last updated a minute ago.

About this proteome

Extracted from UniProtKB

Sus scrofa, the domestic pig, is a member of the Artiodactyla (even-toed ungulates). First domesticated around 10,000 years ago, they are an important agricultural species worldwide. In addition, pigs are useful as a non-primate biomedical model organism, especially for the study of complex traits (e.g. obesity, cardiovascular disease, and arthritis) and for xenotransplantation experiments. The first draft genome was released in 2012 by the Swine Genome Sequencing Consortium, using sequence derived from a single Duroc sow (Duroc 2-14). Assembly 10.2 contains approximately 2.6 Gb of sequence and 21,000 protein-coding genes.

What is included

This atlas covers the reviewed entries of this proteome — the manually curated Swiss-Prot section of UniProtKB. That is 3.2% of it. The other 44,541 entries are unreviewed (TrEMBL) and are not included, which is why the count above is smaller than the proteome. You can run the same predictions on any of them yourself in the online predictors.

1,463 reviewed · 3.2% 44,541 unreviewed · 96.8% 46,004 in the proteome
UniProt proteome
UP000008227
Taxonomy
9823 · PIG
Proteome type
Reference proteome
Strain
Duroc
Superkingdom
eukaryota
Genome assembly
GCA_000003025.6 · Ensembl
Completeness (BUSCO)
97% · 12893/13335

Source: UniProt proteome UP000008227, last modified 26 Mar 2026. Retrieved 10 Sep 2026 (22 hours ago) and cached for a week.


Most viewed pig proteins

What visitors are reading in this proteome — 2,161 entry views in total.

  1. 1 P01219 · CGA GLHA_PIG Chromosome 1 11 views
  2. 2 Q2PKF4 · GNAQ GNAQ_PIG Chromosome 1 11 views
  3. 3 Q8MIR4 · COASY COASY_PIG Chromosome 12 11 views
  4. 4 Q007T5 · ARF6 ARF6_PIG Chromosome 1 10 views
  5. 5 A0A287BDC1 · AKIRIN2 AKIR2_PIG Chromosome 1 9 views
  6. 6 Q07717 · B2M B2MG_PIG Chromosome 1 8 views
  7. 7 A3KCL7 · DDO OXDD_PIG Chromosome 1 7 views
  8. 8 F1SR90 · SELENOS SELS_PIG Chromosome 1 7 views
  9. 9 O18766 · RHO OPSD_PIG Chromosome 13 7 views
  10. 10 P63153 · GRP GRP_PIG Chromosome 1 7 views

What do we provide?

Sequence-based predictions that help explain the behaviour of the proteins in the pig proteome. Not all of these proteins, or regions of them, have a well-defined three-dimensional structure as available from the PDB; many are dynamic or ambiguous. These predictions give clues as to how such regions behave.

DynaMine
backbone and side-chain dynamics
DisoMine
disorder
EFoldMine
early folding
AgMata
beta-sheet aggregation
PSPer
phase separation

How do I proceed?

Open the entry list and click a UniProt accession. Each entry page carries:

  • Overview — every prediction on one plot.
  • Interpretation — disorder classified as order, transition or disorder.
  • Values and Statistics — the numbers behind the plots.
  • Sequence — residues coloured by prediction.
  • PSP — phase-separation propensity.
  • Visualization 1D-3D — a 3D model coloured by prediction.
  • Downloads — sequence, predictions and structures.

Prefer code? Everything is available through the REST API.